Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.89■□□□□ 0.29
Trim11Q99PQ2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Trim11Q99PQ2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Gm12008-201ENSMUST00000117791 755 ntBASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Gm27628-201ENSMUST00000184911 107 ntBASIC16.88■□□□□ 0.29
Trim11Q99PQ2 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim11Q99PQ2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Gm27300-201ENSMUST00000184085 97 ntBASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Gm27335-201ENSMUST00000184758 97 ntBASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim11Q99PQ2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim11Q99PQ2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim11Q99PQ2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Trim11Q99PQ2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms