Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Gm24526-201ENSMUST00000082921 158 ntBASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Gm37714-201ENSMUST00000194742 342 ntBASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh23Q99PF4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.85□□□□□ -0.03
Cdh23Q99PF4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Gm45930-201ENSMUST00000221330 292 ntBASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh23Q99PF4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.85□□□□□ -0.03
Cdh23Q99PF4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm27501-201ENSMUST00000183599 107 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm27847-201ENSMUST00000183711 107 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm27375-201ENSMUST00000183799 107 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm19184-201ENSMUST00000196798 928 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm8652-201ENSMUST00000181363 964 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Gm5279-201ENSMUST00000199575 745 ntBASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cdh23Q99PF4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh23Q99PF4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh23Q99PF4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cdh23Q99PF4 Gm15782-201ENSMUST00000121073 445 ntBASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms