Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H1fooQ8VIK3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.42□□□□□ -0.42
H1fooQ8VIK3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Gm13036-201ENSMUST00000117799 748 ntBASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.41□□□□□ -0.42
H1fooQ8VIK3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Gm18195-201ENSMUST00000207604 706 ntBASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
H1fooQ8VIK3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Mir5131-201ENSMUST00000175426 93 ntBASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.4□□□□□ -0.42
H1fooQ8VIK3 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Gm15590-201ENSMUST00000078419 552 ntBASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms