Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg1dQ8VE91 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Gm15427-201ENSMUST00000117288 531 ntBASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Gm12008-201ENSMUST00000117791 755 ntBASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg1dQ8VE91 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg1dQ8VE91 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Retreg1dQ8VE91 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg1dQ8VE91 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.71□□□□□ -0.06
Retreg1dQ8VE91 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg1dQ8VE91 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Gm27494-201ENSMUST00000184735 189 ntBASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.69□□□□□ -0.06
Retreg1dQ8VE91 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms