Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm45612-201ENSMUST00000211320 160 ntBASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
Rprd1aQ8VDS4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm23935-201ENSMUST00000102303 57 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm24270-201ENSMUST00000102326 57 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Mir1895-201ENSMUST00000122615 79 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm24245-201ENSMUST00000157318 57 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm20553-201ENSMUST00000204205 844 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rprd1aQ8VDS4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.24■□□□□ 0.03
Rprd1aQ8VDS4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Gm11745-201ENSMUST00000121669 448 ntBASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rprd1aQ8VDS4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms