Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm10060-201ENSMUST00000212002 111 ntBASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.85□□□□□ -0.03
Vps39Q8R5L3 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Gm18246-201ENSMUST00000221023 728 ntBASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps39Q8R5L3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps39Q8R5L3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps39Q8R5L3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps39Q8R5L3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps39Q8R5L3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps39Q8R5L3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vps39Q8R5L3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Gm28659-201ENSMUST00000188013 759 ntBASIC14.83□□□□□ -0.04
Vps39Q8R5L3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.83□□□□□ -0.04
Vps39Q8R5L3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps39Q8R5L3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms