Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Chmp7Q8R1T1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp7Q8R1T1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp7Q8R1T1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Gm15653-201ENSMUST00000119247 907 ntBASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Dupd1-202ENSMUST00000224735 548 ntBASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp7Q8R1T1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Gm15321-201ENSMUST00000121290 288 ntBASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Gm24694-201ENSMUST00000180054 110 ntBASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Gm27663-201ENSMUST00000184839 110 ntBASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Gm16476-201ENSMUST00000221544 139 ntBASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp7Q8R1T1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Gm8749-201ENSMUST00000117737 331 ntBASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp7Q8R1T1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Asic1-205ENSMUST00000228185 1818 ntBASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Gm27631-201ENSMUST00000184163 466 ntBASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Gm9182-201ENSMUST00000217829 639 ntBASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp7Q8R1T1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms