Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.13■□□□□ 0.49
Sf3a1Q8K4Z5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sf3a1Q8K4Z5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sf3a1Q8K4Z5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms