Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Gm5264-201ENSMUST00000190584 848 ntBASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Gm2272-201ENSMUST00000194903 582 ntBASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gm14494-201ENSMUST00000118786 435 ntBASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfwd3Q8CIK8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Mir3113-201ENSMUST00000175478 76 ntBASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 Gm5177-201ENSMUST00000183092 997 ntBASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.93□□□□□ -0.18
Rfwd3Q8CIK8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms