Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Gm18669-201ENSMUST00000216049 778 ntBASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Gm10355-201ENSMUST00000097146 517 ntBASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp2bQ8BJF9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2bQ8BJF9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Gm13418-201ENSMUST00000119097 944 ntBASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Gm43767-201ENSMUST00000198933 381 ntBASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2bQ8BJF9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44357-201ENSMUST00000195897 142 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm19658-201ENSMUST00000196231 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44367-201ENSMUST00000196836 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44350-201ENSMUST00000197197 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44390-201ENSMUST00000197533 144 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44313-201ENSMUST00000198018 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44486-201ENSMUST00000198508 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44314-201ENSMUST00000199263 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44394-201ENSMUST00000199558 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44484-201ENSMUST00000199873 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44466-201ENSMUST00000200264 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Gm44359-201ENSMUST00000200671 138 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp2bQ8BJF9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms