Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc40Q8BI79 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc40Q8BI79 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc40Q8BI79 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc40Q8BI79 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc40Q8BI79 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.5■□□□□ 0.07
Ccdc40Q8BI79 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc40Q8BI79 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm13884-201ENSMUST00000118103 829 ntBASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm11452-201ENSMUST00000122376 690 ntBASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm10499-201ENSMUST00000174094 934 ntBASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm10060-201ENSMUST00000212002 111 ntBASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm7787-201ENSMUST00000216858 688 ntBASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc40Q8BI79 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Gm5864-201ENSMUST00000202263 970 ntBASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc40Q8BI79 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 AV026068-213ENSMUST00000223675 1171 ntBASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc40Q8BI79 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms