Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn3Q8BHH8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn3Q8BHH8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gm4899-201ENSMUST00000178708 719 ntBASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gm27628-201ENSMUST00000184911 107 ntBASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms