Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SpidrQ8BGX7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Gm6912-201ENSMUST00000117218 544 ntBASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Gm6180-201ENSMUST00000065243 498 ntBASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Mir125a-201ENSMUST00000083545 68 ntBASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SpidrQ8BGX7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Gm28631-201ENSMUST00000190740 334 ntBASIC17.15■□□□□ 0.34
SpidrQ8BGX7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.15■□□□□ 0.34
SpidrQ8BGX7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SpidrQ8BGX7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SpidrQ8BGX7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SpidrQ8BGX7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SpidrQ8BGX7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Gm23984-201ENSMUST00000157139 203 ntBASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Gm6745-201ENSMUST00000199216 526 ntBASIC17.14■□□□□ 0.33
SpidrQ8BGX7 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.14■□□□□ 0.33
SpidrQ8BGX7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpidrQ8BGX7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms