Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shank2Q80Z38 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.83■□□□□ 0.6
Shank2Q80Z38 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.83■□□□□ 0.6
Shank2Q80Z38 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank2Q80Z38 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank2Q80Z38 Gm27572-201ENSMUST00000183702 255 ntBASIC18.83■□□□□ 0.6
Shank2Q80Z38 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.83■□□□□ 0.6
Shank2Q80Z38 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shank2Q80Z38 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.82■□□□□ 0.6
Shank2Q80Z38 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Gm7619-201ENSMUST00000210649 1282 ntBASIC18.82■□□□□ 0.6
Shank2Q80Z38 Gm17795-201ENSMUST00000214505 757 ntBASIC18.82■□□□□ 0.6
Shank2Q80Z38 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Gm7399-201ENSMUST00000032395 858 ntBASIC18.82■□□□□ 0.6
Shank2Q80Z38 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.82■□□□□ 0.6
Shank2Q80Z38 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank2Q80Z38 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Shank2Q80Z38 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Shank2Q80Z38 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank2Q80Z38 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.8■□□□□ 0.6
Shank2Q80Z38 Gm5425-201ENSMUST00000214125 459 ntBASIC18.8■□□□□ 0.6
Shank2Q80Z38 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.8■□□□□ 0.6
Shank2Q80Z38 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank2Q80Z38 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.79■□□□□ 0.6
Shank2Q80Z38 Gm15240-201ENSMUST00000118156 720 ntBASIC18.79■□□□□ 0.6
Shank2Q80Z38 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC18.79■□□□□ 0.6
Shank2Q80Z38 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shank2Q80Z38 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.79■□□□□ 0.6
Shank2Q80Z38 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank2Q80Z38 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank2Q80Z38 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank2Q80Z38 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank2Q80Z38 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.79■□□□□ 0.6
Shank2Q80Z38 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank2Q80Z38 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.79■□□□□ 0.6
Shank2Q80Z38 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms