Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Gm13223-201ENSMUST00000118609 747 ntBASIC13.69□□□□□ -0.22
Pif1Q80SX8 Gm12151-201ENSMUST00000121374 290 ntBASIC13.69□□□□□ -0.22
Pif1Q80SX8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.69□□□□□ -0.22
Pif1Q80SX8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gm8410-201ENSMUST00000117225 605 ntBASIC13.68□□□□□ -0.22
Pif1Q80SX8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.68□□□□□ -0.22
Pif1Q80SX8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gm15483-201ENSMUST00000120338 456 ntBASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pif1Q80SX8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.67□□□□□ -0.22
Pif1Q80SX8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Gm27437-201ENSMUST00000183429 107 ntBASIC13.67□□□□□ -0.22
Pif1Q80SX8 Gm5745-201ENSMUST00000183748 313 ntBASIC13.67□□□□□ -0.22
Pif1Q80SX8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.67□□□□□ -0.22
Pif1Q80SX8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pif1Q80SX8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms