Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.08□□□□□ -0.47
Vma21Q78T54 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vma21Q78T54 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.08□□□□□ -0.48
Vma21Q78T54 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Gm4535-201ENSMUST00000182274 558 ntBASIC12.08□□□□□ -0.48
Vma21Q78T54 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.08□□□□□ -0.48
Vma21Q78T54 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.08□□□□□ -0.48
Vma21Q78T54 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.08□□□□□ -0.48
Vma21Q78T54 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.08□□□□□ -0.48
Vma21Q78T54 Gm10355-201ENSMUST00000097146 517 ntBASIC12.08□□□□□ -0.48
Vma21Q78T54 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.08□□□□□ -0.48
Vma21Q78T54 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vma21Q78T54 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.07□□□□□ -0.48
Vma21Q78T54 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.07□□□□□ -0.48
Vma21Q78T54 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vma21Q78T54 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.07□□□□□ -0.48
Vma21Q78T54 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.07□□□□□ -0.48
Vma21Q78T54 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.07□□□□□ -0.48
Vma21Q78T54 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vma21Q78T54 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.07□□□□□ -0.48
Vma21Q78T54 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vma21Q78T54 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.07□□□□□ -0.48
Vma21Q78T54 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.07□□□□□ -0.48
Vma21Q78T54 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vma21Q78T54 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.07□□□□□ -0.48
Vma21Q78T54 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vma21Q78T54 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.06□□□□□ -0.48
Vma21Q78T54 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Vma21Q78T54 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vma21Q78T54 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms