Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.46□□□□□ -0.41
Smim12Q78RX3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.46□□□□□ -0.41
Smim12Q78RX3 Gm7787-201ENSMUST00000216858 688 ntBASIC12.46□□□□□ -0.41
Smim12Q78RX3 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.46□□□□□ -0.41
Smim12Q78RX3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smim12Q78RX3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.46□□□□□ -0.42
Smim12Q78RX3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smim12Q78RX3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smim12Q78RX3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gm7222-201ENSMUST00000117512 906 ntBASIC12.44□□□□□ -0.42
Smim12Q78RX3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gm17807-201ENSMUST00000186869 298 ntBASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gm6089-201ENSMUST00000197666 938 ntBASIC12.44□□□□□ -0.42
Smim12Q78RX3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.44□□□□□ -0.42
Smim12Q78RX3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim12Q78RX3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms