Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC20.57■□□□□ 0.88
Topbp1Q6ZQF0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Topbp1Q6ZQF0 AC192088.1-201ENSMUST00000227561 301 ntBASIC20.57■□□□□ 0.88
Topbp1Q6ZQF0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Topbp1Q6ZQF0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Gm13689-201ENSMUST00000119360 685 ntBASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Gm18027-201ENSMUST00000218947 619 ntBASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Topbp1Q6ZQF0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.55■□□□□ 0.88
Topbp1Q6ZQF0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Gm9257-201ENSMUST00000221254 232 ntBASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Gm21038-201ENSMUST00000222205 1383 ntBASIC20.54■□□□□ 0.88
Topbp1Q6ZQF0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm27486-201ENSMUST00000184923 80 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm43094-201ENSMUST00000196549 921 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm6983-201ENSMUST00000214912 628 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm8399-201ENSMUST00000082300 1117 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm13050-201ENSMUST00000122149 1345 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm13385-201ENSMUST00000121089 220 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Gm6091-201ENSMUST00000098307 165 ntBASIC20.53■□□□□ 0.88
Topbp1Q6ZQF0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC20.52■□□□□ 0.88
Topbp1Q6ZQF0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Topbp1Q6ZQF0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Topbp1Q6ZQF0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Topbp1Q6ZQF0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Topbp1Q6ZQF0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Topbp1Q6ZQF0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Topbp1Q6ZQF0 Gm12928-201ENSMUST00000117115 573 ntBASIC20.52■□□□□ 0.87
Topbp1Q6ZQF0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Topbp1Q6ZQF0 Gm27514-201ENSMUST00000183692 110 ntBASIC20.52■□□□□ 0.87
Topbp1Q6ZQF0 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.52■□□□□ 0.87
Topbp1Q6ZQF0 Gm4971-201ENSMUST00000205991 1108 ntBASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms