Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dhx40Q6PE54 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dhx40Q6PE54 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Dhx40Q6PE54 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Dhx40Q6PE54 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
Dhx40Q6PE54 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Dhx40Q6PE54 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Gm18489-201ENSMUST00000172565 551 ntBASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Gm43347-201ENSMUST00000200226 580 ntBASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dhx40Q6PE54 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.44■□□□□ 0.22
Dhx40Q6PE54 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Dhx40Q6PE54 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dhx40Q6PE54 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms