Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.61■□□□□ 0.25
Abcf1Q6P542 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.61■□□□□ 0.25
Abcf1Q6P542 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.6■□□□□ 0.25
Abcf1Q6P542 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.6■□□□□ 0.25
Abcf1Q6P542 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcf1Q6P542 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Gm11780-201ENSMUST00000136880 516 ntBASIC16.59■□□□□ 0.25
Abcf1Q6P542 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Gm2651-201ENSMUST00000203560 838 ntBASIC16.59■□□□□ 0.25
Abcf1Q6P542 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.59■□□□□ 0.25
Abcf1Q6P542 AC153961.1-201ENSMUST00000217760 385 ntBASIC16.59■□□□□ 0.25
Abcf1Q6P542 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.59■□□□□ 0.25
Abcf1Q6P542 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.59■□□□□ 0.25
Abcf1Q6P542 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcf1Q6P542 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abcf1Q6P542 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abcf1Q6P542 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abcf1Q6P542 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Abcf1Q6P542 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abcf1Q6P542 Carlr-201ENSMUST00000181515 2574 ntBASIC16.58■□□□□ 0.25
Abcf1Q6P542 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Gm15173-201ENSMUST00000122049 433 ntBASIC16.58■□□□□ 0.24
Abcf1Q6P542 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Gm7230-201ENSMUST00000173026 815 ntBASIC16.58■□□□□ 0.24
Abcf1Q6P542 Gm6089-201ENSMUST00000197666 938 ntBASIC16.58■□□□□ 0.24
Abcf1Q6P542 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abcf1Q6P542 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms