Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Col7a1Q63870 Gm12241-201ENSMUST00000118330 726 ntBASIC12□□□□□ -0.49
Col7a1Q63870 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12□□□□□ -0.49
Col7a1Q63870 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col7a1Q63870 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12□□□□□ -0.49
Col7a1Q63870 Gm21769-201ENSMUST00000211922 111 ntBASIC12□□□□□ -0.49
Col7a1Q63870 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12□□□□□ -0.49
Col7a1Q63870 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col7a1Q63870 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col7a1Q63870 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12□□□□□ -0.49
Col7a1Q63870 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12□□□□□ -0.49
Col7a1Q63870 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Gm14130-201ENSMUST00000118417 987 ntBASIC12□□□□□ -0.49
Col7a1Q63870 Gm6152-201ENSMUST00000151704 340 ntBASIC12□□□□□ -0.49
Col7a1Q63870 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12□□□□□ -0.49
Col7a1Q63870 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.99□□□□□ -0.49
Col7a1Q63870 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.99□□□□□ -0.49
Col7a1Q63870 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Gm37835-201ENSMUST00000193305 361 ntBASIC11.99□□□□□ -0.49
Col7a1Q63870 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.99□□□□□ -0.49
Col7a1Q63870 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.99□□□□□ -0.49
Col7a1Q63870 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.99□□□□□ -0.49
Col7a1Q63870 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col7a1Q63870 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Gm27682-201ENSMUST00000183930 110 ntBASIC11.98□□□□□ -0.49
Col7a1Q63870 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.98□□□□□ -0.49
Col7a1Q63870 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.98□□□□□ -0.49
Col7a1Q63870 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.98□□□□□ -0.49
Col7a1Q63870 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.98□□□□□ -0.49
Col7a1Q63870 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Mir6927-201ENSMUST00000184494 71 ntBASIC11.98□□□□□ -0.49
Col7a1Q63870 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col7a1Q63870 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col7a1Q63870 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms