Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.97□□□□□ -0.65
Foxc1Q61572 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.97□□□□□ -0.65
Foxc1Q61572 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.97□□□□□ -0.65
Foxc1Q61572 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.97□□□□□ -0.65
Foxc1Q61572 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.97□□□□□ -0.65
Foxc1Q61572 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.97□□□□□ -0.65
Foxc1Q61572 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.97□□□□□ -0.65
Foxc1Q61572 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.97□□□□□ -0.65
Foxc1Q61572 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.97□□□□□ -0.65
Foxc1Q61572 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.97□□□□□ -0.65
Foxc1Q61572 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.97□□□□□ -0.65
Foxc1Q61572 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Foxc1Q61572 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Foxc1Q61572 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.97□□□□□ -0.65
Foxc1Q61572 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Foxc1Q61572 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.96□□□□□ -0.65
Foxc1Q61572 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.96□□□□□ -0.65
Foxc1Q61572 Gm42535-201ENSMUST00000197312 1399 ntBASIC10.96□□□□□ -0.65
Foxc1Q61572 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.96□□□□□ -0.65
Foxc1Q61572 Gm42919-201ENSMUST00000197753 1284 ntBASIC10.96□□□□□ -0.65
Foxc1Q61572 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.96□□□□□ -0.65
Foxc1Q61572 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Foxc1Q61572 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Foxc1Q61572 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Foxc1Q61572 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Foxc1Q61572 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.96□□□□□ -0.66
Foxc1Q61572 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Foxc1Q61572 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Foxc1Q61572 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Foxc1Q61572 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Foxc1Q61572 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Asic1-205ENSMUST00000228185 1818 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms