Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vsx2Q61412 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vsx2Q61412 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx2Q61412 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx2Q61412 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx2Q61412 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx2Q61412 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.47□□□□□ -0.09
Vsx2Q61412 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.47□□□□□ -0.09
Vsx2Q61412 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.46□□□□□ -0.09
Vsx2Q61412 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.46□□□□□ -0.09
Vsx2Q61412 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.46□□□□□ -0.09
Vsx2Q61412 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx2Q61412 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Vsx2Q61412 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.46□□□□□ -0.1
Vsx2Q61412 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vsx2Q61412 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vsx2Q61412 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vsx2Q61412 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.45□□□□□ -0.1
Vsx2Q61412 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.45□□□□□ -0.1
Vsx2Q61412 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.45□□□□□ -0.1
Vsx2Q61412 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Vsx2Q61412 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.45□□□□□ -0.1
Vsx2Q61412 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vsx2Q61412 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Vsx2Q61412 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Vsx2Q61412 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vsx2Q61412 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vsx2Q61412 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vsx2Q61412 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.44□□□□□ -0.1
Vsx2Q61412 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vsx2Q61412 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.44□□□□□ -0.1
Vsx2Q61412 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.44□□□□□ -0.1
Vsx2Q61412 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.44□□□□□ -0.1
Vsx2Q61412 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vsx2Q61412 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms