Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-3Q5R1E6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-3Q5R1E6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-3Q5R1E6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gm6550-201ENSMUST00000187574 993 ntBASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gm34391-201ENSMUST00000203706 907 ntBASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gm6376-201ENSMUST00000209407 580 ntBASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gm18246-201ENSMUST00000221023 728 ntBASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-3Q5R1E6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms