Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm6433-201ENSMUST00000118634 875 ntBASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm15794-201ENSMUST00000120182 631 ntBASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm12497-201ENSMUST00000138778 237 ntBASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Mir3081-201ENSMUST00000175305 84 ntBASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms