Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Gm13223-201ENSMUST00000118609 747 ntBASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Gm45098-201ENSMUST00000207179 657 ntBASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.27■□□□□ 0.36
Prpf38aQ4FK66 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38aQ4FK66 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gm8410-201ENSMUST00000117225 605 ntBASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gm28630-201ENSMUST00000187806 498 ntBASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gm38294-201ENSMUST00000192831 381 ntBASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gm2451-201ENSMUST00000199447 999 ntBASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Gm10290-201ENSMUST00000200451 999 ntBASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38aQ4FK66 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms