Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm24196-201ENSMUST00000179161 110 ntBASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Gm8598-201ENSMUST00000221184 836 ntBASIC18.12■□□□□ 0.49
Shank3Q4ACU6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Gm45784-201ENSMUST00000188360 142 ntBASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shank3Q4ACU6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Gm26464-201ENSMUST00000157094 305 ntBASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.11■□□□□ 0.49
Shank3Q4ACU6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.11■□□□□ 0.49
Shank3Q4ACU6 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.11■□□□□ 0.49
Shank3Q4ACU6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Shank3Q4ACU6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Gm5425-201ENSMUST00000214125 459 ntBASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank3Q4ACU6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Gm21470-201ENSMUST00000187680 696 ntBASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.09■□□□□ 0.49
Shank3Q4ACU6 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.09■□□□□ 0.49
Shank3Q4ACU6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms