Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Gm6345-202ENSMUST00000180900 204 ntBASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim40Q3UWA4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Gm13312-201ENSMUST00000119631 718 ntBASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Gm17808-201ENSMUST00000200859 894 ntBASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim40Q3UWA4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms