Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Gm9726-201ENSMUST00000180321 678 ntBASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 AW822252-206ENSMUST00000208904 237 ntBASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ctdnep1Q3TP92 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdnep1Q3TP92 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Gm44492-201ENSMUST00000197012 141 ntBASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.08■□□□□ 0.32
Ctdnep1Q3TP92 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Gm27525-201ENSMUST00000184465 107 ntBASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.07■□□□□ 0.32
Ctdnep1Q3TP92 Olfr286-202ENSMUST00000205305 969 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms