Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ebf1Q07802 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ebf1Q07802 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.03■□□□□ -0
Ebf1Q07802 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf1Q07802 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ebf1Q07802 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Ebf1Q07802 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ebf1Q07802 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.02■□□□□ -0
Ebf1Q07802 Gm11543-201ENSMUST00000120758 370 ntBASIC15.02■□□□□ -0
Ebf1Q07802 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.02■□□□□ -0
Ebf1Q07802 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.02■□□□□ -0
Ebf1Q07802 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.02■□□□□ -0
Ebf1Q07802 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.02■□□□□ -0
Ebf1Q07802 Gm5866-201ENSMUST00000177881 973 ntBASIC15.02■□□□□ -0
Ebf1Q07802 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ebf1Q07802 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ebf1Q07802 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.02■□□□□ -0
Ebf1Q07802 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ebf1Q07802 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ebf1Q07802 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf1Q07802 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Gm13223-201ENSMUST00000118609 747 ntBASIC15.01□□□□□ -0.01
Ebf1Q07802 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Gm27618-201ENSMUST00000183671 60 ntBASIC15.01□□□□□ -0.01
Ebf1Q07802 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf1Q07802 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ebf1Q07802 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ebf1Q07802 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15□□□□□ -0.01
Ebf1Q07802 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15□□□□□ -0.01
Ebf1Q07802 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15□□□□□ -0.01
Ebf1Q07802 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Gm16026-204ENSMUST00000162652 683 ntBASIC15□□□□□ -0.01
Ebf1Q07802 Gm37277-201ENSMUST00000194052 1111 ntBASIC15□□□□□ -0.01
Ebf1Q07802 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15□□□□□ -0.01
Ebf1Q07802 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15□□□□□ -0.01
Ebf1Q07802 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf1Q07802 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms