Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Gm18307-201ENSMUST00000206864 949 ntBASIC10.74□□□□□ -0.69
Hspg2Q05793 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.73□□□□□ -0.69
Hspg2Q05793 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.73□□□□□ -0.69
Hspg2Q05793 Gm29127-201ENSMUST00000188304 517 ntBASIC10.73□□□□□ -0.69
Hspg2Q05793 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.73□□□□□ -0.69
Hspg2Q05793 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.73□□□□□ -0.69
Hspg2Q05793 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hspg2Q05793 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.73□□□□□ -0.69
Hspg2Q05793 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.73□□□□□ -0.69
Hspg2Q05793 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.73□□□□□ -0.69
Hspg2Q05793 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC10.73□□□□□ -0.69
Hspg2Q05793 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Gm27572-201ENSMUST00000183702 255 ntBASIC10.73□□□□□ -0.69
Hspg2Q05793 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hspg2Q05793 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hspg2Q05793 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm14723-201ENSMUST00000118686 215 ntBASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.72□□□□□ -0.69
Hspg2Q05793 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.72□□□□□ -0.69
Hspg2Q05793 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.72□□□□□ -0.69
Hspg2Q05793 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Hspg2Q05793 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.72□□□□□ -0.69
Hspg2Q05793 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.72□□□□□ -0.69
Hspg2Q05793 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Gm7399-201ENSMUST00000032395 858 ntBASIC10.72□□□□□ -0.69
Hspg2Q05793 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.72□□□□□ -0.69
Hspg2Q05793 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hspg2Q05793 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms