Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.02□□□□□ -0.17
Nkx3-2P97503 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.02□□□□□ -0.17
Nkx3-2P97503 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx3-2P97503 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.01□□□□□ -0.17
Nkx3-2P97503 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.01□□□□□ -0.17
Nkx3-2P97503 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.01□□□□□ -0.17
Nkx3-2P97503 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nkx3-2P97503 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14□□□□□ -0.17
Nkx3-2P97503 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx3-2P97503 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Nkx3-2P97503 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nkx3-2P97503 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx3-2P97503 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Nkx3-2P97503 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Gm14701-201ENSMUST00000117156 348 ntBASIC14□□□□□ -0.17
Nkx3-2P97503 Gm13365-201ENSMUST00000121188 973 ntBASIC14□□□□□ -0.17
Nkx3-2P97503 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14□□□□□ -0.17
Nkx3-2P97503 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14□□□□□ -0.17
Nkx3-2P97503 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx3-2P97503 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nkx3-2P97503 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14□□□□□ -0.17
Nkx3-2P97503 Gm10154-201ENSMUST00000084445 354 ntBASIC14□□□□□ -0.17
Nkx3-2P97503 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14□□□□□ -0.17
Nkx3-2P97503 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14□□□□□ -0.17
Nkx3-2P97503 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Nkx3-2P97503 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Nkx3-2P97503 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx3-2P97503 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Gm5312-201ENSMUST00000203728 547 ntBASIC13.99□□□□□ -0.17
Nkx3-2P97503 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx3-2P97503 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx3-2P97503 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms