Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm18473-201ENSMUST00000220543 868 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm37812-201ENSMUST00000195216 2475 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Snord83b-201ENSMUST00000104546 94 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.92□□□□□ -0.82
PrkdcP97313 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PrkdcP97313 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.91□□□□□ -0.82
PrkdcP97313 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm18905-201ENSMUST00000205454 928 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.91□□□□□ -0.82
PrkdcP97313 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
PrkdcP97313 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
PrkdcP97313 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm4804-201ENSMUST00000182234 999 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.91□□□□□ -0.82
PrkdcP97313 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC9.91□□□□□ -0.82
PrkdcP97313 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC9.91□□□□□ -0.82
PrkdcP97313 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.91□□□□□ -0.82
PrkdcP97313 Gm16505-201ENSMUST00000179981 232 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Gm44608-201ENSMUST00000206827 855 ntBASIC9.91□□□□□ -0.82
PrkdcP97313 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC9.91□□□□□ -0.82
PrkdcP97313 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PrkdcP97313 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.9□□□□□ -0.82
PrkdcP97313 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.9□□□□□ -0.82
PrkdcP97313 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC9.9□□□□□ -0.82
PrkdcP97313 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.9□□□□□ -0.82
PrkdcP97313 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.9□□□□□ -0.82
PrkdcP97313 Gm13216-201ENSMUST00000117145 591 ntBASIC9.9□□□□□ -0.82
PrkdcP97313 Gm37986-201ENSMUST00000193285 383 ntBASIC9.9□□□□□ -0.82
PrkdcP97313 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.9□□□□□ -0.82
PrkdcP97313 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PrkdcP97313 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC9.9□□□□□ -0.83
PrkdcP97313 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.9□□□□□ -0.83
PrkdcP97313 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.9□□□□□ -0.83
PrkdcP97313 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.9□□□□□ -0.83
PrkdcP97313 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.9□□□□□ -0.83
PrkdcP97313 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.9□□□□□ -0.83
PrkdcP97313 Gm29396-201ENSMUST00000185659 716 ntBASIC9.9□□□□□ -0.83
PrkdcP97313 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
PrkdcP97313 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
PrkdcP97313 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms