Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.04□□□□□ -0.32
Hist1h3bP84228 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hist1h3bP84228 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h3bP84228 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Gm2651-201ENSMUST00000203560 838 ntBASIC13.03□□□□□ -0.32
Hist1h3bP84228 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.03□□□□□ -0.32
Hist1h3bP84228 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h3bP84228 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h3bP84228 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.02□□□□□ -0.33
Hist1h3bP84228 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hist1h3bP84228 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Gm12008-201ENSMUST00000117791 755 ntBASIC13.01□□□□□ -0.33
Hist1h3bP84228 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.01□□□□□ -0.33
Hist1h3bP84228 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hist1h3bP84228 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms