Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.21□□□□□ -0.29
SgcbP82349 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SgcbP82349 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SgcbP82349 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
SgcbP82349 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.21□□□□□ -0.29
SgcbP82349 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.21□□□□□ -0.29
SgcbP82349 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.21□□□□□ -0.29
SgcbP82349 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.21□□□□□ -0.29
SgcbP82349 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.21□□□□□ -0.29
SgcbP82349 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcbP82349 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.21□□□□□ -0.3
SgcbP82349 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SgcbP82349 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SgcbP82349 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SgcbP82349 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SgcbP82349 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
SgcbP82349 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SgcbP82349 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SgcbP82349 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.2□□□□□ -0.3
SgcbP82349 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcbP82349 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SgcbP82349 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SgcbP82349 Gm19891-201ENSMUST00000189771 303 ntBASIC13.2□□□□□ -0.3
SgcbP82349 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.2□□□□□ -0.3
SgcbP82349 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcbP82349 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SgcbP82349 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcbP82349 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcbP82349 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SgcbP82349 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SgcbP82349 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcbP82349 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SgcbP82349 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SgcbP82349 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcbP82349 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
SgcbP82349 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SgcbP82349 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.19□□□□□ -0.3
SgcbP82349 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SgcbP82349 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SgcbP82349 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.19□□□□□ -0.3
SgcbP82349 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SgcbP82349 Mir1895-201ENSMUST00000122615 79 ntBASIC13.19□□□□□ -0.3
SgcbP82349 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.19□□□□□ -0.3
SgcbP82349 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.19□□□□□ -0.3
SgcbP82349 Gm16026-204ENSMUST00000162652 683 ntBASIC13.19□□□□□ -0.3
SgcbP82349 Gm27494-201ENSMUST00000184735 189 ntBASIC13.19□□□□□ -0.3
SgcbP82349 Gm43575-201ENSMUST00000196420 516 ntBASIC13.19□□□□□ -0.3
SgcbP82349 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.19□□□□□ -0.3
SgcbP82349 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcbP82349 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.19□□□□□ -0.3
SgcbP82349 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.19□□□□□ -0.3
SgcbP82349 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SgcbP82349 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SgcbP82349 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SgcbP82349 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SgcbP82349 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms