Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 BC037039-201ENSMUST00000192003 2205 ntBASIC11.94□□□□□ -0.5
Lmo4P61969 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.94□□□□□ -0.5
Lmo4P61969 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Lmo4P61969 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.94□□□□□ -0.5
Lmo4P61969 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Gm14719-201ENSMUST00000121891 340 ntBASIC11.94□□□□□ -0.5
Lmo4P61969 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.94□□□□□ -0.5
Lmo4P61969 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.94□□□□□ -0.5
Lmo4P61969 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Gm37230-201ENSMUST00000194491 818 ntBASIC11.94□□□□□ -0.5
Lmo4P61969 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Gm2423-201ENSMUST00000074863 733 ntBASIC11.94□□□□□ -0.5
Lmo4P61969 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lmo4P61969 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.94□□□□□ -0.5
Lmo4P61969 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lmo4P61969 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lmo4P61969 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lmo4P61969 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lmo4P61969 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Gm6222-201ENSMUST00000120787 396 ntBASIC11.93□□□□□ -0.5
Lmo4P61969 Mir1897-201ENSMUST00000122581 272 ntBASIC11.93□□□□□ -0.5
Lmo4P61969 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Gm23547-201ENSMUST00000158210 271 ntBASIC11.93□□□□□ -0.5
Lmo4P61969 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Gm27631-201ENSMUST00000184163 466 ntBASIC11.93□□□□□ -0.5
Lmo4P61969 Gm16476-201ENSMUST00000221544 139 ntBASIC11.93□□□□□ -0.5
Lmo4P61969 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lmo4P61969 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lmo4P61969 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Lmo4P61969 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lmo4P61969 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.93□□□□□ -0.5
Lmo4P61969 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lmo4P61969 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lmo4P61969 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lmo4P61969 Gm15653-201ENSMUST00000119247 907 ntBASIC11.92□□□□□ -0.5
Lmo4P61969 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.92□□□□□ -0.5
Lmo4P61969 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Lmo4P61969 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms