Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.14■□□□□ 0.01
Tubgcp3P58854 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.14■□□□□ 0.01
Tubgcp3P58854 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubgcp3P58854 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.13■□□□□ 0.01
Tubgcp3P58854 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.13■□□□□ 0.01
Tubgcp3P58854 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.13■□□□□ 0.01
Tubgcp3P58854 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.13■□□□□ 0.01
Tubgcp3P58854 Mzt1-203ENSMUST00000227948 952 ntBASIC15.13■□□□□ 0.01
Tubgcp3P58854 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Gm7461-201ENSMUST00000058918 827 ntBASIC15.13■□□□□ 0.01
Tubgcp3P58854 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.13■□□□□ 0.01
Tubgcp3P58854 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubgcp3P58854 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.12■□□□□ 0.01
Tubgcp3P58854 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.12■□□□□ 0.01
Tubgcp3P58854 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tubgcp3P58854 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms