Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Rrp1P56183 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rrp1P56183 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp1P56183 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp1P56183 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp1P56183 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp1P56183 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rrp1P56183 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.72■□□□□ 0.27
Rrp1P56183 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.72■□□□□ 0.27
Rrp1P56183 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.72■□□□□ 0.27
Rrp1P56183 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Rrp1P56183 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Gm5682-201ENSMUST00000173402 505 ntBASIC16.72■□□□□ 0.27
Rrp1P56183 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rrp1P56183 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.72■□□□□ 0.27
Rrp1P56183 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rrp1P56183 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp1P56183 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rrp1P56183 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.71■□□□□ 0.27
Rrp1P56183 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rrp1P56183 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44357-201ENSMUST00000195897 142 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm19658-201ENSMUST00000196231 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44367-201ENSMUST00000196836 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44350-201ENSMUST00000197197 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44390-201ENSMUST00000197533 144 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44313-201ENSMUST00000198018 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44486-201ENSMUST00000198508 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44314-201ENSMUST00000199263 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44394-201ENSMUST00000199558 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44484-201ENSMUST00000199873 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44466-201ENSMUST00000200264 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 Gm44359-201ENSMUST00000200671 138 ntBASIC16.71■□□□□ 0.27
Rrp1P56183 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.71■□□□□ 0.27
Rrp1P56183 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rrp1P56183 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp1P56183 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rrp1P56183 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.7■□□□□ 0.26
Rrp1P56183 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rrp1P56183 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.7■□□□□ 0.26
Rrp1P56183 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Rrp1P56183 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.7■□□□□ 0.26
Rrp1P56183 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Gm6089-201ENSMUST00000197666 938 ntBASIC16.7■□□□□ 0.26
Rrp1P56183 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp1P56183 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.7■□□□□ 0.26
Rrp1P56183 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.7■□□□□ 0.26
Rrp1P56183 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms