Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh6P54276 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Msh6P54276 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.67■□□□□ 0.58
Msh6P54276 Gm6745-201ENSMUST00000199216 526 ntBASIC18.67■□□□□ 0.58
Msh6P54276 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.66■□□□□ 0.58
Msh6P54276 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Msh6P54276 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
Msh6P54276 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Msh6P54276 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Msh6P54276 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.66■□□□□ 0.58
Msh6P54276 Gm23984-201ENSMUST00000157139 203 ntBASIC18.66■□□□□ 0.58
Msh6P54276 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.66■□□□□ 0.58
Msh6P54276 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.66■□□□□ 0.58
Msh6P54276 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Msh6P54276 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh6P54276 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.65■□□□□ 0.58
Msh6P54276 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Msh6P54276 Gm29310-201ENSMUST00000185468 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21825-201ENSMUST00000185728 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm29109-201ENSMUST00000185895 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21896-201ENSMUST00000186520 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21873-201ENSMUST00000186728 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21794-201ENSMUST00000187056 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21880-201ENSMUST00000187275 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21826-201ENSMUST00000187451 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21198-201ENSMUST00000188393 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21749-201ENSMUST00000189343 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21901-201ENSMUST00000189568 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm29424-201ENSMUST00000189716 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm28599-201ENSMUST00000189838 694 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21867-201ENSMUST00000189917 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm29269-201ENSMUST00000190087 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21722-201ENSMUST00000190153 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm28423-201ENSMUST00000190701 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21899-201ENSMUST00000190745 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21910-201ENSMUST00000191163 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21849-201ENSMUST00000191571 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm28678-201ENSMUST00000191593 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm20910-201ENSMUST00000193268 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm21871-201ENSMUST00000194621 696 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm45098-201ENSMUST00000207179 657 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Dupd1-202ENSMUST00000224735 548 ntBASIC18.65■□□□□ 0.58
Msh6P54276 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Gm25857-201ENSMUST00000082788 129 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.65■□□□□ 0.58
Msh6P54276 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Msh6P54276 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.65■□□□□ 0.58
Msh6P54276 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh6P54276 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Msh6P54276 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Msh6P54276 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh6P54276 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms