Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prox1P48437 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prox1P48437 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Prox1P48437 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.26□□□□□ -0.13
Prox1P48437 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.26□□□□□ -0.13
Prox1P48437 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.26□□□□□ -0.13
Prox1P48437 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Prox1P48437 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Prox1P48437 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prox1P48437 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.25□□□□□ -0.13
Prox1P48437 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prox1P48437 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.25□□□□□ -0.13
Prox1P48437 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.25□□□□□ -0.13
Prox1P48437 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Gm27742-201ENSMUST00000184667 60 ntBASIC14.25□□□□□ -0.13
Prox1P48437 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.25□□□□□ -0.13
Prox1P48437 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.25□□□□□ -0.13
Prox1P48437 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Prox1P48437 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prox1P48437 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prox1P48437 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prox1P48437 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.24□□□□□ -0.13
Prox1P48437 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Prox1P48437 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Prox1P48437 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prox1P48437 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Gm8344-201ENSMUST00000119813 856 ntBASIC14.24□□□□□ -0.13
Prox1P48437 Olfr129-201ENSMUST00000122318 993 ntBASIC14.24□□□□□ -0.13
Prox1P48437 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.24□□□□□ -0.13
Prox1P48437 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prox1P48437 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prox1P48437 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prox1P48437 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms