Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.32□□□□□ -0.12
Tnfsf4P43488 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Gm25990-201ENSMUST00000102440 86 ntBASIC14.32□□□□□ -0.12
Tnfsf4P43488 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Ank2-226ENSMUST00000189368 339 ntBASIC14.32□□□□□ -0.12
Tnfsf4P43488 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf4P43488 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.31□□□□□ -0.12
Tnfsf4P43488 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.31□□□□□ -0.12
Tnfsf4P43488 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf4P43488 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.3□□□□□ -0.12
Tnfsf4P43488 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms