Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HttP42859 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.52■□□□□ 0.07
HttP42859 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.52■□□□□ 0.07
HttP42859 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HttP42859 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HttP42859 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.51■□□□□ 0.07
HttP42859 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.51■□□□□ 0.07
HttP42859 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.51■□□□□ 0.07
HttP42859 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HttP42859 Celf4-206ENSMUST00000224553 1729 ntBASIC15.51■□□□□ 0.07
HttP42859 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HttP42859 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HttP42859 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HttP42859 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HttP42859 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.5■□□□□ 0.07
HttP42859 Mir7032-201ENSMUST00000185154 79 ntBASIC15.5■□□□□ 0.07
HttP42859 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.5■□□□□ 0.07
HttP42859 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.5■□□□□ 0.07
HttP42859 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.5■□□□□ 0.07
HttP42859 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.5■□□□□ 0.07
HttP42859 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.5■□□□□ 0.07
HttP42859 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.5■□□□□ 0.07
HttP42859 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.5■□□□□ 0.07
HttP42859 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.5■□□□□ 0.07
HttP42859 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.5■□□□□ 0.07
HttP42859 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HttP42859 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
HttP42859 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.5■□□□□ 0.07
HttP42859 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.5■□□□□ 0.07
HttP42859 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.5■□□□□ 0.07
HttP42859 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.5■□□□□ 0.07
HttP42859 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HttP42859 Gm5161-201ENSMUST00000075243 853 ntBASIC15.5■□□□□ 0.07
HttP42859 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.5■□□□□ 0.07
HttP42859 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HttP42859 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
HttP42859 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.49■□□□□ 0.07
HttP42859 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HttP42859 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.49■□□□□ 0.07
HttP42859 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HttP42859 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.49■□□□□ 0.07
HttP42859 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.49■□□□□ 0.07
HttP42859 Gm5425-201ENSMUST00000214125 459 ntBASIC15.49■□□□□ 0.07
HttP42859 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HttP42859 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HttP42859 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HttP42859 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HttP42859 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
HttP42859 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HttP42859 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.48■□□□□ 0.07
HttP42859 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HttP42859 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.48■□□□□ 0.07
HttP42859 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms