Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.58□□□□□ -0.24
Nkx2-2P42586 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.58□□□□□ -0.24
Nkx2-2P42586 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Nkx2-2P42586 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.57□□□□□ -0.24
Nkx2-2P42586 Gm43514-201ENSMUST00000198852 424 ntBASIC13.57□□□□□ -0.24
Nkx2-2P42586 Gm2451-201ENSMUST00000199447 999 ntBASIC13.57□□□□□ -0.24
Nkx2-2P42586 Gm10290-201ENSMUST00000200451 999 ntBASIC13.57□□□□□ -0.24
Nkx2-2P42586 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.57□□□□□ -0.24
Nkx2-2P42586 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-2P42586 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.56□□□□□ -0.24
Nkx2-2P42586 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Gm10175-201ENSMUST00000086013 645 ntBASIC13.56□□□□□ -0.24
Nkx2-2P42586 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Nkx2-2P42586 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.56□□□□□ -0.24
Nkx2-2P42586 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-2P42586 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm12134-201ENSMUST00000122109 520 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm17271-201ENSMUST00000165535 355 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm8000-201ENSMUST00000188378 592 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm5264-201ENSMUST00000190584 848 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Olfr286-202ENSMUST00000205305 969 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms