Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm12134-201ENSMUST00000122109 520 ntBASIC14.37□□□□□ -0.11
TfamP40630 Gm7230-201ENSMUST00000173026 815 ntBASIC14.37□□□□□ -0.11
TfamP40630 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Gm7787-201ENSMUST00000216858 688 ntBASIC14.37□□□□□ -0.11
TfamP40630 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.37□□□□□ -0.11
TfamP40630 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.37□□□□□ -0.11
TfamP40630 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.37□□□□□ -0.11
TfamP40630 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TfamP40630 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TfamP40630 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.36□□□□□ -0.11
TfamP40630 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.36□□□□□ -0.11
TfamP40630 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.36□□□□□ -0.11
TfamP40630 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.36□□□□□ -0.11
TfamP40630 Gm11764-201ENSMUST00000120221 623 ntBASIC14.36□□□□□ -0.11
TfamP40630 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TfamP40630 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.36□□□□□ -0.11
TfamP40630 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.36□□□□□ -0.11
TfamP40630 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.36□□□□□ -0.11
TfamP40630 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TfamP40630 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
TfamP40630 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TfamP40630 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TfamP40630 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TfamP40630 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Gm6550-201ENSMUST00000187574 993 ntBASIC14.35□□□□□ -0.11
TfamP40630 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.35□□□□□ -0.11
TfamP40630 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.35□□□□□ -0.11
TfamP40630 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Carlr-201ENSMUST00000181515 2574 ntBASIC14.35□□□□□ -0.11
TfamP40630 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.35□□□□□ -0.11
TfamP40630 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.35□□□□□ -0.11
TfamP40630 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TfamP40630 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TfamP40630 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TfamP40630 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TfamP40630 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Gm7862-201ENSMUST00000121461 292 ntBASIC14.34□□□□□ -0.11
TfamP40630 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Gm45167-201ENSMUST00000208007 322 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms