Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Gm15920-201ENSMUST00000118998 402 ntBASIC12.17□□□□□ -0.46
Timp3P39876 Gm13597-201ENSMUST00000121239 375 ntBASIC12.17□□□□□ -0.46
Timp3P39876 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.17□□□□□ -0.46
Timp3P39876 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Timp3P39876 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Gm17968-201ENSMUST00000194902 784 ntBASIC12.17□□□□□ -0.46
Timp3P39876 Gm45612-201ENSMUST00000211320 160 ntBASIC12.17□□□□□ -0.46
Timp3P39876 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.17□□□□□ -0.46
Timp3P39876 Thap2-203ENSMUST00000218989 527 ntBASIC12.17□□□□□ -0.46
Timp3P39876 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.17□□□□□ -0.46
Timp3P39876 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.17□□□□□ -0.46
Timp3P39876 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Timp3P39876 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Timp3P39876 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.17□□□□□ -0.46
Timp3P39876 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Timp3P39876 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.16□□□□□ -0.46
Timp3P39876 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.16□□□□□ -0.46
Timp3P39876 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Gm12008-201ENSMUST00000117791 755 ntBASIC12.16□□□□□ -0.46
Timp3P39876 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.16□□□□□ -0.46
Timp3P39876 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.16□□□□□ -0.46
Timp3P39876 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.16□□□□□ -0.46
Timp3P39876 Gm2272-201ENSMUST00000194903 582 ntBASIC12.16□□□□□ -0.46
Timp3P39876 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.16□□□□□ -0.46
Timp3P39876 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.16□□□□□ -0.46
Timp3P39876 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.16□□□□□ -0.46
Timp3P39876 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Timp3P39876 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Timp3P39876 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Timp3P39876 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Timp3P39876 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Timp3P39876 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.15□□□□□ -0.46
Timp3P39876 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.15□□□□□ -0.46
Timp3P39876 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.15□□□□□ -0.46
Timp3P39876 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Timp3P39876 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Timp3P39876 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Gm8396-201ENSMUST00000057361 823 ntBASIC12.15□□□□□ -0.46
Timp3P39876 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.15□□□□□ -0.46
Timp3P39876 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Timp3P39876 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Timp3P39876 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Timp3P39876 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Timp3P39876 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Timp3P39876 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms