Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.2■□□□□ 0.02
Rb1P13405 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Rb1P13405 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.2■□□□□ 0.02
Rb1P13405 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rb1P13405 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rb1P13405 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.19■□□□□ 0.02
Rb1P13405 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rb1P13405 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rb1P13405 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Gm13597-201ENSMUST00000121239 375 ntBASIC15.19■□□□□ 0.02
Rb1P13405 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 AA543401-201ENSMUST00000164248 1269 ntBASIC15.19■□□□□ 0.02
Rb1P13405 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Gm5177-201ENSMUST00000183092 997 ntBASIC15.19■□□□□ 0.02
Rb1P13405 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.19■□□□□ 0.02
Rb1P13405 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rb1P13405 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rb1P13405 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.19■□□□□ 0.02
Rb1P13405 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.19■□□□□ 0.02
Rb1P13405 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rb1P13405 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rb1P13405 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Rb1P13405 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.18■□□□□ 0.02
Rb1P13405 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.18■□□□□ 0.02
Rb1P13405 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Gm45747-201ENSMUST00000212203 999 ntBASIC15.18■□□□□ 0.02
Rb1P13405 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.18■□□□□ 0.02
Rb1P13405 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.18■□□□□ 0.02
Rb1P13405 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.18■□□□□ 0.02
Rb1P13405 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rb1P13405 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.18■□□□□ 0.02
Rb1P13405 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.17■□□□□ 0.02
Rb1P13405 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.17■□□□□ 0.02
Rb1P13405 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rb1P13405 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rb1P13405 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Rb1P13405 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.17■□□□□ 0.02
Rb1P13405 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.17■□□□□ 0.02
Rb1P13405 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rb1P13405 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rb1P13405 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.17■□□□□ 0.02
Rb1P13405 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms