Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
NefmP08553 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
NefmP08553 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NefmP08553 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC21.91■■□□□ 1.1
NefmP08553 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC21.91■■□□□ 1.1
NefmP08553 Gm37153-201ENSMUST00000193637 231 ntBASIC21.91■■□□□ 1.1
NefmP08553 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.91■■□□□ 1.1
NefmP08553 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NefmP08553 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NefmP08553 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NefmP08553 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Trav13-3-201ENSMUST00000117226 336 ntBASIC21.9■■□□□ 1.1
NefmP08553 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.9■■□□□ 1.1
NefmP08553 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
NefmP08553 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NefmP08553 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
NefmP08553 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NefmP08553 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NefmP08553 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC21.89■■□□□ 1.1
NefmP08553 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NefmP08553 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NefmP08553 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NefmP08553 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NefmP08553 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.89■■□□□ 1.1
NefmP08553 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NefmP08553 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC21.89■■□□□ 1.09
NefmP08553 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.89■■□□□ 1.09
NefmP08553 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.89■■□□□ 1.09
NefmP08553 CT010506.4-201ENSMUST00000225457 351 ntBASIC21.89■■□□□ 1.09
NefmP08553 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NefmP08553 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NefmP08553 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC21.89■■□□□ 1.09
NefmP08553 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC21.89■■□□□ 1.09
NefmP08553 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NefmP08553 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC21.89■■□□□ 1.09
NefmP08553 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC21.89■■□□□ 1.09
NefmP08553 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NefmP08553 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NefmP08553 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NefmP08553 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
NefmP08553 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NefmP08553 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Gm4081-201ENSMUST00000195287 1838 ntBASIC21.88■■□□□ 1.09
NefmP08553 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC21.88■■□□□ 1.09
NefmP08553 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Mir7071-201ENSMUST00000184847 69 ntBASIC21.88■■□□□ 1.09
NefmP08553 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC21.88■■□□□ 1.09
NefmP08553 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.88■■□□□ 1.09
NefmP08553 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NefmP08553 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC21.88■■□□□ 1.09
NefmP08553 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC21.87■■□□□ 1.09
NefmP08553 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Gm13418-201ENSMUST00000119097 944 ntBASIC21.87■■□□□ 1.09
NefmP08553 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.87■■□□□ 1.09
NefmP08553 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NefmP08553 Gm6089-201ENSMUST00000197666 938 ntBASIC21.87■■□□□ 1.09
NefmP08553 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC21.87■■□□□ 1.09
NefmP08553 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NefmP08553 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NefmP08553 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
NefmP08553 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NefmP08553 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC21.86■■□□□ 1.09
NefmP08553 Gm14451-201ENSMUST00000121581 1542 ntBASIC21.86■■□□□ 1.09
NefmP08553 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms