Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hdac3O88895 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hdac3O88895 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hdac3O88895 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hdac3O88895 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.3□□□□□ -0.28
Hdac3O88895 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hdac3O88895 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.29□□□□□ -0.28
Hdac3O88895 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hdac3O88895 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.29□□□□□ -0.28
Hdac3O88895 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.29□□□□□ -0.28
Hdac3O88895 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Gm8318-201ENSMUST00000182954 872 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.29□□□□□ -0.28
Hdac3O88895 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.29□□□□□ -0.28
Hdac3O88895 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hdac3O88895 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hdac3O88895 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.29□□□□□ -0.28
Hdac3O88895 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hdac3O88895 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.29□□□□□ -0.28
Hdac3O88895 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Hdac3O88895 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Hdac3O88895 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Gm5864-201ENSMUST00000202263 970 ntBASIC13.28□□□□□ -0.28
Hdac3O88895 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.28□□□□□ -0.28
Hdac3O88895 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.28□□□□□ -0.28
Hdac3O88895 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Hdac3O88895 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hdac3O88895 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hdac3O88895 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hdac3O88895 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Hdac3O88895 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hdac3O88895 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.27□□□□□ -0.29
Hdac3O88895 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Hdac3O88895 Gm10060-201ENSMUST00000212002 111 ntBASIC13.27□□□□□ -0.29
Hdac3O88895 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.27□□□□□ -0.29
Hdac3O88895 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Hdac3O88895 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hdac3O88895 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms