Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.44■□□□□ 0.06
Ttc3O88196 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Gm4875-201ENSMUST00000118257 786 ntBASIC15.44■□□□□ 0.06
Ttc3O88196 Gm6222-201ENSMUST00000120787 396 ntBASIC15.44■□□□□ 0.06
Ttc3O88196 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 AA619741-201ENSMUST00000195095 646 ntBASIC15.44■□□□□ 0.06
Ttc3O88196 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ttc3O88196 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ttc3O88196 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.43■□□□□ 0.06
Ttc3O88196 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ttc3O88196 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.43■□□□□ 0.06
Ttc3O88196 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ttc3O88196 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ttc3O88196 Mir1897-201ENSMUST00000122581 272 ntBASIC15.43■□□□□ 0.06
Ttc3O88196 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.43■□□□□ 0.06
Ttc3O88196 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.43■□□□□ 0.06
Ttc3O88196 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.43■□□□□ 0.06
Ttc3O88196 Gm6218-201ENSMUST00000219812 628 ntBASIC15.43■□□□□ 0.06
Ttc3O88196 Gm16476-201ENSMUST00000221544 139 ntBASIC15.43■□□□□ 0.06
Ttc3O88196 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ttc3O88196 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ttc3O88196 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.42■□□□□ 0.06
Ttc3O88196 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Carlr-201ENSMUST00000181515 2574 ntBASIC15.42■□□□□ 0.06
Ttc3O88196 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ttc3O88196 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ttc3O88196 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.42■□□□□ 0.06
Ttc3O88196 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Ttc3O88196 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.42■□□□□ 0.06
Ttc3O88196 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ttc3O88196 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.42■□□□□ 0.06
Ttc3O88196 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.42■□□□□ 0.06
Ttc3O88196 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.42■□□□□ 0.06
Ttc3O88196 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.42■□□□□ 0.06
Ttc3O88196 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ttc3O88196 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ttc3O88196 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ttc3O88196 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.42■□□□□ 0.06
Ttc3O88196 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ttc3O88196 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Ttc3O88196 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ttc3O88196 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.41■□□□□ 0.06
Ttc3O88196 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.41■□□□□ 0.06
Ttc3O88196 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.41■□□□□ 0.06
Ttc3O88196 Gm7653-201ENSMUST00000214567 508 ntBASIC15.41■□□□□ 0.06
Ttc3O88196 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.41■□□□□ 0.06
Ttc3O88196 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ttc3O88196 Mir125a-201ENSMUST00000083545 68 ntBASIC15.41■□□□□ 0.06
Ttc3O88196 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms