Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.05□□□□□ -0.64
Rpl35aO55142 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rpl35aO55142 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Gm17968-201ENSMUST00000194902 784 ntBASIC11.05□□□□□ -0.64
Rpl35aO55142 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Thap2-203ENSMUST00000218989 527 ntBASIC11.05□□□□□ -0.64
Rpl35aO55142 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rpl35aO55142 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rpl35aO55142 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl35aO55142 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Rpl35aO55142 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.04□□□□□ -0.64
Rpl35aO55142 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.04□□□□□ -0.64
Rpl35aO55142 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.04□□□□□ -0.64
Rpl35aO55142 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm10175-201ENSMUST00000086013 645 ntBASIC11.04□□□□□ -0.64
Rpl35aO55142 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.04□□□□□ -0.64
Rpl35aO55142 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Rpl35aO55142 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl35aO55142 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm25911-201ENSMUST00000157621 56 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms